rs217009191 SNP Detail

Summary

• ID
  rs217009191
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34101373 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAATAGGTT ATTTGATGCC
  AGGTATTCAA TGGAGAAAGG AGAAAGGAAA TCCTACTGGG GTAGCCAGAA AAGATTGACG
  TGCTGGGGAT GATGGTGCAC ACCTTTAATC CAGCTTCTGG AGGAAGAAGC AATAAATCTC
  GATAAGTTAA AGGCCACCCT GGTACACATA GTGAGTTCCA GGACAGACAG GGCTACATGA
  Y
  GAGACTCTGT CTCAAAAGGA AAGGAAAGGA AAAAAAGAGA GAATGCTGAC TTAATTAAAG
  ATGGGTGGTT TTTTAGTAAC AGGAAAGGGA AGCCAGTTTT GGAGGGAGAA AATCAAATGA
  ATATTGATAT TATTCATACT CAGGAAAAAA AGCCTTAAAG ACTCTTAGGA AGTAAAAATG
  GGGGGGCATA TGATTTTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324918819	CHEV_15_34030982	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217009191					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34101373 () rs orientation: forward

Symbol	Name	Function Class
Mtdh	metadherin	within coordinates
Tssr131017	transcription start site region 131017	1696 bp downstream
Tssr133963	transcription start site region 133963	1694 bp upstream