rs217020511 SNP Detail

Summary

• ID
  rs217020511
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128357221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGAATTTGTT GTGTAGTCCA
  TGATGGCACT AAACTCCAAC CTCCCACGTC CCAGGATTAT AGATGTGTGC CACCAACACC
  TGGGTGTTGG CACTTTGGGA AGTCCAGACC CTTTCTTTAT TTCACATTTG TTTTATCTGT
  GTGTGCACAT GCATGCATGC ATGCCATAGG GTATGTGTGG AGGTCAGAGG TCAGCCATGC
  R
  GTGTCTATCA GGCTTGGCAG CAAGCACCTC TGCCCACCTC AACCTTTCTT GTTCTTTTTG
  CCCCTGCTTG AAGAGTCTCC ATTCCCTACC AAAGTGCCTG TTTCTCCCGC AGAACTAAAA
  AACCCCAGTC TGAAACTTTC CTGGGGTTTA CGTCAGATCT CCCCAGGCAC AGTGAGGACT
  TGGAGGCACA GGCTAAAGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323534388	CHEV_10_127958408	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217020511					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128357221 () rs orientation: forward

Symbol	Name	Function Class
Esyt1	extended synaptotagmin-like protein 1	within coordinates
Gm29585	predicted gene 29585	911 bp upstream
Tssr99885	transcription start site region 99885	604 bp upstream
Tssr99886	transcription start site region 99886	1113 bp downstream