rs217083929 SNP Detail

Summary

• ID
  rs217083929
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101128062 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGATTGCC AGGCGTGGTC
  CTAAGGGAGG CATAGCTGCA GTCAGTCCCT CACCCCAGTC CCTCTCCTCC CCACTATTTT
  GAAGTAGCAA TCTTTTAATG AATGACAGAA CAGTAATTTT AAAAAAGGGA AATACAAAGC
  CTGGGATATT AGTGACACTA TCTCCCAAGC AGACTGACTT AGCATGGACC ATACTATACA
  Y
  CATCAGGAGG ACGATTCAAG GTCAATGGCC TTTAGTACAC CCATGGGCAC TGATGTCTCT
  GCTATGTCCA CCTTTACATC TGATAAGATT TTTGCTTGTG CACTGTGTGT GTGTTTTAGT
  AAAATGCTCC TCCCCCTCTC CCTACTGCTC ACCTATTTGA GTGCTTAGTC ACCAGGAAGT
  GGGACTGTTT GAAAAGATTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320851489	CHEV_3_101024669	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217083929					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101128062 () rs orientation: forward

Symbol	Name	Function Class
Gm65590	predicted gene, 65590	within coordinates
Rr581978	regulatory region 581978	648 bp distal