rs217133513 SNP Detail

Summary

• ID
  rs217133513
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:110812515 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGTTATTT CTAATACTGA
  CCAACATTCT CTTAAAATAT GAAATTCCTC GAAATTCATA ATGTCCTGGT TTTTAATAGG
  TGAATAGCAA TCCATTGTGT AAATGAAGCC CATTTTTTTA ATCTATTCTT TGGTTTAGGG
  GCATCTGGGT TGTTTCCAGC TTCTGTATAT CACAAATAAA GTTGGTATGA ACTTAGGAGG
  R
  ACCCCTGTCC TTGTGGTATG GTGGGACATC TTTTGGGTAT ATGCCCAGGA GCAGAATAGC
  TGGATCTTCA TGTAGAACTA TTTCCAATTT TCTGTAGAAC TGCCAGATTG ATTTGCAGAG
  TTGTACTAGA TTTCAATTCC ACCAGCAATG GAGGTGTGTT CCTCTCTCTA CACACCCTTG
  CCAGCATTTG GTGTTGATTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320458626	CHEV_2_110822327	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217133513					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:110812515 () rs orientation: forward

Symbol	Name	Function Class
Rr562605	regulatory region 562605	103 bp distal
Rr562606	regulatory region 562606	192 bp distal