rs217147667 SNP Detail

Summary

• ID
  rs217147667
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:3416410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACTCCTGT GCCCGCCTCT
  TCCCCCTCGA GGTTCCTTCG GGGGAGGGAG GGGCAGTAGC GGGGGTTAAC ACCCCCCAAA
  ACCTCCGTCT TCCATTTTCT GGTACTCCCT CTCATCCATG TCCCTCTTCC CACCTCAAAT
  CCCCAAACTC TGGCCTCTTT CAAGGGCCCG TTCTCCCCCT TGGACAAATT GGGGGGGGGC
  S
  GGGGGAGGTC GCCAAAAAAC CGCCCATCCC ACTCCCTTTA TTAGGGGAGG AGGGCGAGGT
  AGCACAGTGT TAACACACAC GGAACCAGAA CGGCCCCGGG GTGGGGGGAG GGGGCAGGGG
  AGGGACGGGG GCTTTTAGTT TGCATCTTAG GGGGGAGGGG GGAGGGAGAA CAGCAGCAGT
  TATAACCTGT CTTTACGCAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322091732	CHEV_7_3367487	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217147667					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:3416410 () rs orientation: forward

Symbol	Name	Function Class
Cacng7	calcium channel, voltage-dependent, gamma subunit 7	within coordinates
Cpgi18210	CpG island 18210	834 bp distal
Gm72265	predicted gene, 72265	within coordinates
Rr641804	regulatory region 641804	317 bp proximal
Tssr64254	transcription start site region 64254	1923 bp downstream
Tssr64255	transcription start site region 64255	1706 bp downstream
Tssr64256	transcription start site region 64256	1681 bp downstream
Tssr64257	transcription start site region 64257	1003 bp downstream
Tssr64258	transcription start site region 64258	897 bp downstream
Tssr64259	transcription start site region 64259	492 bp downstream
Tssr64260	transcription start site region 64260	469 bp downstream