rs217155132 SNP Detail

Summary

• ID
  rs217155132
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:12570379 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGAAAAC CCTGGACTGA
  ACTGCATCTT GTGCCTTTCA GGAGTCTGTG AAGTTTGAAG ATGTATCTCT GACGTTTACC
  GAGGAAGAGT GGGCACAGCT GGACTTCCAA CAGAAGTGCC TGTACAGGGA GATCATGATG
  GAGAACTACA GCAACATGAT TTCAGTGGGT AAGGCAGCCT CCACTTTAAT AAAGAGCTGT
  K
  TGGGTGGGTG GAGCATGCTT TTAATTCCAG CACCTCAGAG GTGGAGGAGG ATTGGAAGTT
  CAGTGCCAGG CTTGACTCTA CCTGCCCCCA CCCCAATTCT GGATGTGCGG TACCCCTGAA
  CTGTAAGTGC TTGGGCTCAG GCTAAAGGGA CCAGAGGAGA AGTGTTAAGG GAGTGTAGAG
  CTTGGTAGAG AGGAAAAAGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322106508	CHEV_7_13421801	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217155132					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:12570379 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18318	CpG island 18318	1033 bp distal
Rr642383	regulatory region 642383	1681 bp distal
Rr642384	regulatory region 642384	1506 bp distal
Rr642385	regulatory region 642385	959 bp distal
Rr642386	regulatory region 642386	605 bp distal
Tssr64479	transcription start site region 64479	1641 bp downstream
Tssr64480	transcription start site region 64480	1400 bp downstream
Tssr64481	transcription start site region 64481	1191 bp downstream
Tssr64482	transcription start site region 64482	498 bp downstream
Zfp110	zinc finger protein 110	within coordinates