rs217178877 SNP Detail

Summary

• ID
  rs217178877
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:79516379 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACACACA CACACACACA
  CGCACGCACG CACGCACGCA CGCACGCACG CACGCACGCA CGCACATGCA CACGTAAAAC
  ACAGAGACAG TCTAAATGGT GTCTGTGTGT TTACATCATT TCTAATTTGG ACCAGAATTG
  CTTTTATTTT TATCACTTTT ATTTACTCAT GTCAGTGTCA ATATTTATGT GTGGGTGTGC
  R
  TGCTTTGGTT GGTTTCTGGA GGTCACAGTA GCATCAGGAG GTTGGTCCTC TCGGGTTATA
  GGGAAGAAAC ACAAGTTGTT AGGCCTAAAG GCAAGTGCAT TCATCTGCTG AGCCATCGTT
  GGGAACGTGT ATATTTCCAT TTTTCACATA GGCAGGTTTC CAGCGTTAGA AAAGGCAAAC
  GAGTCAGCAC CAGGGACTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321835102	CHEV_6_79489390	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217178877					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:79516379 () rs orientation: forward

Symbol	Name	Function Class
Gm6261	predicted gene 6261	1812 bp upstream