rs217200168 SNP Detail

Summary

• ID
  rs217200168
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:70183786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGTTTTATA TGTGCTGAAT TGGAAATACA
  GACATGTACA Aatatatata tatatatgca tatttttgta tatgtacatg tatacacaca
  tgtataggta taggtatagg tataggtata ggtataggta taggtatagg tataggtata
  K
  gtataggtat atgtataggt atatgtatag gtatatgtat aggtatactt tcttgttgat
  attttataga aactataaca caacacctat ctgcatacac acttacattg tattataagg
  tacaatttaa agtatgaaga ggggatgttt                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324086850	CHEV_12_71237999	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217200168					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:70183786 () rs orientation: forward

Symbol	Name	Function Class
Gm56526	predicted gene, 56526	713 bp upstream
Rr403332	regulatory region 403332	348 bp downstream
Rr467201	regulatory region 467201	724 bp distal
Rr467202	regulatory region 467202	223 bp distal
Tssr116556	transcription start site region 116556	736 bp upstream