CCTTGCTTGC TTGAGTCAGG CTCTCTTTTT GCTCACTGCT GTGTTCACCG GGACAACAGG CTCTAACGCT TCCAGGGATT CTCCTGTCTC TTTCCACAGA CGCACGGAGA TTATAGGCAC GCTATCTACC CAGCTTTATG TGAGTCCTGG AAATCTAAAC TTGGGGCCTC TCACTGAGAC ACCACTGCTT TACCTGATGA R CCATCTCCCA GGCCTAGAAA GGAGCCACTG GGTCTAGGGT AGTTCATCCC AGCCACCCAG ACAGTTTGGC CCAGGCTACC TGAGTGTCTC TATCTCTTGT ATAGCATACC TACTGCAGGC TGCAGATAGC TGGAGAAGTG AGGAGAAGTG AGGGCTGGCC ATCTAATCAG CTCCTTCAGG CTAAGCCCAA CACTGCTCTC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss321028254 | CHEV_3_151815462 | CHEVERUD | SCREENING_POP | f | SNP | A | G |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs217206429 | SNP | A | G |
Location: Chr3:151858135 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gipc2 | GIPC PDZ domain containing family, member 2 | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Gm16198 | predicted gene 16198 | 949 bp upstream | ||||||
Gm64753 | predicted gene, 64753 | within coordinates | ||||||
Rr587469 | regulatory region 587469 | 173 bp distal | ||||||
Rr587470 | regulatory region 587470 | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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