rs217231896 SNP Detail

Summary

• ID
  rs217231896
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11687274 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTAAAGGC GAGCACCACC
  ACCTCCTGGC TATAAAATTT GAAAATCATA CTGAGCCATT AAGGAGTAGA CACTATTCAT
  GGAAGTTTTA CTTTTTTTTT TTTTTTTTTT TGGTTTTTTT CGAGACAGGG TTTCTCTGTA
  TAGCCCTGGC TGTCCTGGAA CTCACGTTGT AGACCAGGCT GGTCTCGAAC TCAGAAATCC
  R
  CCTGCCTCTG CCTCCCAAGT GCTGGGATTA AAGGCGTGAG CCGCCACCAC CGGCCAGCTT
  CTACTTTTTA CTTAATGAAG TTTTACTTTT TCCCTTTTGC TATATATTTG TTCCTTGTGT
  ATGTTTATCC TTGAGGAGGC TACATAGTAG AGATTAAAAT TACTGTATTG CAGAAACTGG
  GGCCTGGGAC TCATCATCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322492733	CHEV_8_11637274	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217231896					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11687274 () rs orientation: forward

Symbol	Name	Function Class
Ankrd10	ankyrin repeat domain 10	1517 bp upstream
Cpgi20087	CpG island 20087	607 bp distal
Gm45592	predicted gene 45592	8 bp upstream
Gm64331	predicted gene, 64331	within coordinates
Mir7238	microRNA 7238	1538 bp upstream
Rr186041	regulatory region 186041	273 bp distal
Rr400761	regulatory region 400761	1256 bp downstream
Tssr80391	transcription start site region 80391	1629 bp upstream
Tssr80392	transcription start site region 80392	1551 bp upstream
Tssr80393	transcription start site region 80393	1531 bp upstream
Tssr80394	transcription start site region 80394	1509 bp upstream