rs217249146 SNP Detail

Summary

• ID
  rs217249146
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:82285044 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATGTCTAA GCAGGAAGCA
  GTCGGAGCTC CACTGTTCTT TGGCATCATT AAGATAGTGA AGTATACCTT TAGGAGAAAT
  TTGGAGAACA CTGCTGGTCT ATTTCGAAGA AGCCAGTGTA TGAGGGGAAC AAACATAAAG
  TATCTTAAGG TGGAGAAAGA ATCCAGTGAA GGTAAAAAAC TTAAATTAAA AAGAGCATAA
  R
  CCACTTCTTT GTGAAGTTTA CTGGCTTAGC ATGAAGATTT ACCAAGAAAC ACTTGGCCAA
  CTGGGAACAG AGTTAAAGTA AATAGGTTTG GAATGAAGAT TCATCTGGGA TGTGTGCAAG
  GCTCTAAGAT TAATCTTGTT AGAGATTAAT CAAAATTAAA ATCAAAATTA AACTAAAGAA
  AGTAAACAGA TGGATTCTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323041528	CHEV_9_82296598	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217249146					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:82285044 () rs orientation: forward

Symbol	Name	Function Class
Rr197700	regulatory region 197700	244 bp distal
Rr197701	regulatory region 197701	957 bp proximal
Rr205139	regulatory region 205139	1027 bp proximal