rs217256824 SNP Detail

Summary

• ID
  rs217256824
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142619313 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGAAAAGG GGGTTTCTGT TTAAAAAAGC
  ATAAACTCCA GAAGGGTGTC TCACCCCTAA AGCCAACCTT AGTGCTCCTG GCCACACTAG
  CTGCTGGTGA AGCTGAATCC CAGATTTGCC AGAATCTGGC CAGCCTGGGA GGGAGGCGCT
  R
  CCAGTATCAG AAGCTGGGGA AAGGCAGCAC ACGTCATAGA ATGTAGGATA AAGGAGGTGA
  GGAAACTGAG GTTAGGGTTG GGGAGTGTCT TGCTGCATGT GCCTCAGTGA AGGCTGTGGA
  CACTTTGTCA ACTGCATTTC TACACCAGCC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322473964	CHEV_7_150251481	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217256824					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142619313 () rs orientation: forward

Symbol	Name	Function Class
Cd81	CD81 antigen	within coordinates
Rr366644	regulatory region 366644	1819 bp downstream
Tssr70273	transcription start site region 70273	617 bp downstream
Tssr70274	transcription start site region 70274	599 bp downstream
Tssr70275	transcription start site region 70275	178 bp upstream
Tssr70276	transcription start site region 70276	208 bp upstream
Tssr70277	transcription start site region 70277	357 bp upstream
Tssr70278	transcription start site region 70278	1154 bp upstream
Tssr70279	transcription start site region 70279	1789 bp upstream
Tssr70280	transcription start site region 70280	1825 bp upstream
Tssr70281	transcription start site region 70281	1959 bp upstream