rs217276835 SNP Detail

Summary

• ID
  rs217276835
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127922954 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAACAAATG CTCATTagct gggcgtggta
  ttacatacat atacctggga tcctagcaca tgggaaacag gcagaaggat caggaactca
  atgctatttc cacctacata gtgaattcct gcctaacttc actatatgac actgtctcac
  M
  ccagaaaaTA GGACAttttt ttttttttta aagatttatt tattgattat atgtaagtac
  actgtagctg tcttcagaca ctcaagaggg agtcagatct tgttacggat ggttgtgagc
  caccatgtgg ttgctgggat ttgaactcct                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323531646	CHEV_10_127524141	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217276835					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127922954 () rs orientation: forward

Symbol	Name	Function Class
Atp5f1b	ATP synthase F1 subunit beta	within coordinates
Gm55458	predicted gene, 55458	1725 bp downstream
Mir677	microRNA 677	1722 bp downstream
Rr441098	regulatory region 441098	396 bp distal
Rr441099	regulatory region 441099	495 bp distal
Tssr96322	transcription start site region 96322	1557 bp downstream
Tssr96323	transcription start site region 96323	988 bp downstream
Tssr96324	transcription start site region 96324	918 bp downstream
Tssr96325	transcription start site region 96325	779 bp downstream
Tssr96326	transcription start site region 96326	763 bp downstream
Tssr96327	transcription start site region 96327	736 bp downstream
Tssr96328	transcription start site region 96328	696 bp downstream
Tssr96329	transcription start site region 96329	1228 bp upstream
Tssr96330	transcription start site region 96330	1288 bp upstream