rs217291847 SNP Detail

Summary

• ID
  rs217291847
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78355059 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cagagaaat ggctcagtga acaagatctc
  ttgctctttg cagagaacct gccgtgtttg attctcagca cccacatagt ggctcataac
  cttttattgc tccagaaaat ctgatgcact cttctgactt ttgtgggaat aggctagatc
  R
  aggcgcgcgc gcacacccac acacccatac accacatgca caggcaaaac aatcatacac
  ataaaataaa TGTCAAAAAA ATGTTTAAGC TGTATATAAA TAATGGAGTT TTGATTTGGA
  GACGTGATAT TCATTTGTAG ACCCAGATGG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323016287	CHEV_9_78295584	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217291847					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78355059 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22068	CpG island 22068	203 bp proximal
Gm17324	predicted gene, 17324	88 bp downstream
Mto1	mitochondrial tRNA translation optimization 1	313 bp upstream
Rr401544	regulatory region 401544	260 bp upstream
Rr683554	regulatory region 683554	within coordinates
Rr683555	regulatory region 683555	999 bp proximal
Tssr86287	transcription start site region 86287	415 bp upstream