rs217301716 SNP Detail

Summary

• ID
  rs217301716
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61861015 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGCCTGTT CTCTGCAAGC
  CAAAGCTACC ACCACCATAG CCCAAGCTGG GAGGGGCCCT GAAATAAAAC AGAACACCGC
  CCACCTCCTA TCTACATTCG GCTGATCTCT CCAGAGACCA GACACAGGAG CACCTTGGGC
  ATCCAGCAGG ACCTGGTCAT ACCTCTTCTC CACCAGTCTT CCTGTGTTCC CTCTGTTCAT
  Y
  CTCTGGCTCT GGTCTGTCCA TCACGGGCTT GGTTCCCCCC AGAGGATCTT CAACGCTCTT
  GAGACCCACC CCTAAATAAA AGCAAGGGAA CAAAGGAGCC ACTCTGAAAA AGTGATGCTA
  CCCTTGGAAA GAATGTAGAC CTGTGTAGAG TGTGATTCAA TTAGTCTGCT CCTATAGAGT
  GAACATTCAC CAGCTGGGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323330447	CHEV_10_61487984	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217301716					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61861015 () rs orientation: forward

Symbol	Name	Function Class
Gm47919	predicted gene, 47919	within coordinates
Gm66887	predicted gene, 66887	1718 bp downstream
Rr432503	regulatory region 432503	564 bp distal