rs217305975 SNP Detail

Summary

• ID
  rs217305975
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:98769536 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAGGCAGA TTTCTGAGTT
  TGAGTCCAGC CTGGTCTACA GAGTGAGTTC CAGGAGAGTC AGGGATACCC AGAGAAACCC
  TGTCCCAACC CACCCCCAAC CAAATAAGTA AATAAATAAA TAAATAAATA AATAAAATTT
  GTTACCGGCT TTAAATACCA AGCTTTACCT CCAAGAAACA AAAGAAGATT CATTTTCATA
  A
  TTTCCATTTC CATTTTATTT TATAAATAAA GAGAATTTCT TGGTGGGGAT GGGACAAAGA
  GGTGACAAAA ACCTGACTCG GGTGGGAAAA TAATGATACC ACAAATAAAG GCAATAAAAA
  CCAAAGGGAC TTCCAAGGAC TGATTCTTTG TCTAAACCAT CAAAACGGCC AAAATTCCCC
  TGCCACACCA CCCTCCGTGC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CE/J	DBA/1J	DBA/2J	I/LnJ	KK/HlJ	LP/J	MA/MyJ	PL/J	WSB/EiJ
ss378636855	MGP_WTSI_9_98787902	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CE/J	DBA/1J	DBA/2J	I/LnJ	KK/HlJ	LP/J	MA/MyJ	PL/J	WSB/EiJ
rs217305975					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss378636855	MGP_WTSI_9_98787902	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:98769536 () rs orientation: forward

Symbol	Name	Function Class
Gm33700	predicted gene, 33700	728 bp upstream