rs217309189 SNP Detail

Summary

• ID
  rs217309189
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13256990 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTCCCTG GGTGGAATTG
  CCTTGACAGC ATTCTGAAGG CCCTTGAGAG AGATTAGAGA TGAAAGTCTC TGAAGCTGCT
  AATCCCATGA TTTGGGAGGC AGAGGCAGGG GAATTACTAG TTTGAGAGGA GTATGAGTAA
  GATTTTGTCT GGGGATTGGG AGAAGAGGAG TGGAAGGGGG AAGGAGGAGG AAGAAGGAAG
  R
  AGAGAGAAGA GGGGGAGGGG AGGGGAGAGG GGGAGGGGAA GGAGGCAGGG GTGGGGAGAG
  GAGTAGGAAA AGAAAAAGCT AGGCAGACAA CCTATTGACA ATTCCCTGGG GGACAGAAGA
  CCTCTCTGGT TCAGAGTTTG GGTCACTGTG GTTCTCCACC TCTGGACAGC ATGACCAGAC
  AGAACACAGC CCTGTCATGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505099	CHEV_8_13206990	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217309189					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13256990 () rs orientation: forward

Symbol	Name	Function Class
Rr381722	regulatory region 381722	474 bp upstream
Rr659880	regulatory region 659880	1692 bp distal
Rr659881	regulatory region 659881	219 bp distal
Rr659882	regulatory region 659882	1391 bp proximal
Rr659883	regulatory region 659883	1652 bp proximal
Rr659884	regulatory region 659884	1772 bp proximal