rs217333782 SNP Detail

Summary

• ID
  rs217333782
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13264486 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAAGGCAG AGGCAAGGGG
  ATTTCCCACT CCCTTAGTGT CACTGGGACT GAACCATTGA AGTAGCCCTC AGCAAAATGG
  AGCCAAAACC CCTCTGCACA AAGGCAGGTT GCTGCCTGTA GCCCTCTGCG CTTGTATGGG
  AAGTGTCTCA ACGCCACCAC GCCCGGCTAT CTCAACGCTT TCTTAGCAGG AGTCTGCACA
  Y
  GGATTTTCTA GCAGGCTACT ACTCTGAGTT AATTAGTGAT GATGCGCTTT TGGATGCATG
  GAGCAAGTTC CATGCCTGGC AGTGGTGGAG CATGTGCATG CTTTTAATCC TAGCACTCAG
  GAGGCAGAGG CGGAGGTGGA GGCAGGAGGA TATCTGTGAG TTCAAGGCCA GCCTGGTCCA
  CAGAGTGAGT TTCAGGACAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505139	CHEV_8_13214486	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217333782					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13264486 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	406 bp upstream
Rr368495	regulatory region 368495	650 bp downstream
Rr368496	regulatory region 368496	313 bp downstream
Rr659886	regulatory region 659886	981 bp distal
Rr659887	regulatory region 659887	1023 bp distal
Rr659888	regulatory region 659888	within coordinates
Rr659889	regulatory region 659889	362 bp distal
Rr659890	regulatory region 659890	1985 bp proximal