rs217383240 SNP Detail

Summary

• ID
  rs217383240
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126048915 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATGC AGACTGTGGC TGCAGGTGCG
  R
  CTGGGACGGA GCACACCTGC CTGCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322450804	CHEV_7_133593257	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217383240					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126048915 () rs orientation: forward

Symbol	Name	Function Class
Atp2a1	ATPase, Ca++ transporting, cardiac muscle, fast twitch 1	within coordinates
Tssr69023	transcription start site region 69023	1829 bp downstream
Tssr74676	transcription start site region 74676	1841 bp upstream
Tssr74677	transcription start site region 74677	1798 bp upstream
Tssr74678	transcription start site region 74678	1777 bp upstream
Tssr74679	transcription start site region 74679	1757 bp upstream
Tssr74680	transcription start site region 74680	1739 bp upstream
Tssr74681	transcription start site region 74681	1713 bp upstream
Tssr74682	transcription start site region 74682	1702 bp upstream
Tssr74683	transcription start site region 74683	1499 bp upstream
Tssr74684	transcription start site region 74684	1397 bp upstream
Tssr74685	transcription start site region 74685	1361 bp upstream
Tssr74686	transcription start site region 74686	1105 bp upstream
Tssr74687	transcription start site region 74687	1069 bp upstream
Tssr74688	transcription start site region 74688	984 bp upstream
Tssr74689	transcription start site region 74689	913 bp upstream
Tssr74690	transcription start site region 74690	497 bp upstream
Tssr74691	transcription start site region 74691	437 bp upstream
Tssr74692	transcription start site region 74692	409 bp downstream
Tssr74693	transcription start site region 74693	435 bp downstream
Tssr74694	transcription start site region 74694	558 bp downstream
Tssr74695	transcription start site region 74695	759 bp downstream