rs217409120 SNP Detail

Summary

• ID
  rs217409120
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95721322 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCTTGCTC CTACTCCTTT
  TTGGCTTCTT TTTCCTCCCA TCTCTCCCTT CCCACCATCT CCTTTCCTTC TCCACAGCCT
  CCTTTCTTCC CTCTCTTTCT TGTTATCCTG AATCCTCCCT CCCCCCTCCT CTGACACTGA
  CATGTAGTTA ATGGTGGGTT GTCAGGACCC TGGGGGCCAT CATAGCTGGC CCTCTAAGGG
  S
  ACGCAAACAG CCTGGAGAGC CATCAGGAAG TGGTTAGGGG TGGCCACACT CCCTACCTCT
  CCAGCTGAAC ATTTTTGAGT CTCAGCTGTC ACAGCATAGG TCTCAGAGAA GGGTAGTGGG
  AGATAACTAG ACAAGGAGAA TTGGAAATAC CACAGCCTTG GGAAGAGCCA GAGAGGAGCT
  GAGATCCATT GTCACCTGGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322809827	CHEV_8_97518594	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217409120					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95721322 () rs orientation: forward

Symbol	Name	Function Class
Adgrg1	adhesion G protein-coupled receptor G1	within coordinates
Tssr78941	transcription start site region 78941	1992 bp downstream
Tssr78942	transcription start site region 78942	1820 bp downstream
Tssr78943	transcription start site region 78943	1757 bp downstream
Tssr78944	transcription start site region 78944	367 bp downstream
Tssr78945	transcription start site region 78945	304 bp downstream
Tssr78946	transcription start site region 78946	261 bp downstream
Tssr78947	transcription start site region 78947	within coordinates
Tssr78948	transcription start site region 78948	51 bp upstream
Tssr78949	transcription start site region 78949	99 bp upstream
Tssr78950	transcription start site region 78950	146 bp upstream
Tssr78951	transcription start site region 78951	897 bp upstream
Tssr78952	transcription start site region 78952	989 bp upstream
Tssr78953	transcription start site region 78953	1010 bp upstream
Tssr78954	transcription start site region 78954	1056 bp upstream