rs217464573 SNP Detail

Summary

• ID
  rs217464573
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr19:39303856 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGACA TTATTACCTC TTTAAAATGC
  T
  TTAAGTCTGT CTTTTCTACA GAAAG                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325804095	CHEV_19_39389902	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217464573					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:39303856 () rs orientation: forward

Symbol	Name	Function Class
Cyp2c29	cytochrome P450, family 2, subfamily c, polypeptide 29	Intron
Tssr156337	transcription start site region 156337	68 bp upstream
Tssr156338	transcription start site region 156338	102 bp upstream
Tssr156339	transcription start site region 156339	127 bp upstream
Tssr156340	transcription start site region 156340	227 bp upstream
Tssr156341	transcription start site region 156341	276 bp upstream