rs217516129 SNP Detail

Summary

• ID
  rs217516129
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:133577727 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTATGAAT TTAAAAGAAA
  CCATGGTCAT TTTTAAACAA AATGAACATA TAAACATCTC CAAAGAACAT TCTAGAACCA
  GGGCCAGCAA AGGCTTGCTG TTATAGATTA CACATGGGTG TGAAGCCCTC TGAAGGCTAC
  ACTGGAGCCC AGCCTGTCAC TGGTGTTTCT TGAACTTTTA TGGCCCATTT TCATCTGCTC
  Y
  ATGCTGAGAG TAGAGGAGAA CACACTTTGT AGAGAAACTG TGGTCCCTCT GGGAAATGTG
  TTTTTTTTTT TTCTTTTTTC TTTTTCTGGG GAAGGGATGC TATTAGCCAG TCATTTAAGA
  ACATAGTTTG CAGCAGTAGA AGATGCTGAT GAACAGAGAG GCAAAGGGAG GTGCAGAGAG
  ACAAGATACA AAGGAGCAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322453655	CHEV_7_141167681	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217516129					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:133577727 () rs orientation: forward

Symbol	Name	Function Class
5033415L01Rik	RIKEN cDNA 5033415L01 gene	80 bp downstream
Adam12	ADAM metallopeptidase domain 12	within coordinates