rs217524576 SNP Detail

Summary

• ID
  rs217524576
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45175514 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGAGGGAG GGAGGGAAGG
  AGGGAGAGAG AGAGGGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG
  AGATTTCACT ACCTTGTTTT CTCCTAGGGT AATTATCATC ATCATCATTA AACTTAGGAT
  AGTTCTAAGC AGAATGGGGG GCAGTTTCTC CCATGATTTG TGTGAAGGTG GATGGTCTAC
  R
  CAGAAGCTCT AGGCCCAGTG CAGGCACCAT CAACCCTAAG CATGGTTCTC TGGATTTTTC
  TGGATGGTTT GAGCACCCTC TGCCTGGACT GCAGCCTGGG TCACTCACAC TGCTCCGTCG
  TGATAAGTAA ACACTGCTCC TCCGACCACT CTGCCTTGTT AATTCGGGAT TCCAAGCGGG
  GCAGCACCTT GACACAAAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322942719	CHEV_9_45072299	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217524576					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45175514 () rs orientation: forward

Symbol	Name	Function Class
Il10ra	interleukin 10 receptor, alpha	within coordinates
Tssr84758	transcription start site region 84758	666 bp upstream
Tssr89253	transcription start site region 89253	1277 bp upstream
Tssr89254	transcription start site region 89254	1208 bp upstream
Tssr89255	transcription start site region 89255	1148 bp upstream
Tssr89256	transcription start site region 89256	1117 bp upstream
Tssr89257	transcription start site region 89257	26 bp upstream
Tssr89258	transcription start site region 89258	1 bp downstream
Tssr89259	transcription start site region 89259	24 bp downstream