rs217541619 SNP Detail

Summary

• ID
  rs217541619
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97021709 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCACTTA AACATAGCCT
  AAAGCTGTAA GAGAAAAAAA CTGAAAAATT CAATTATAGA AATAAAGGTT TTCCTCTTTG
  GTGGAGGAAA AAAATGTTTG CAAAGTAGAA AAAGAACAAG CTAGAAAAAA GATCTGCAGG
  TTGGCTTCTT CGTTTCCTAA GTAATCCTCT TGGGATAAGG CACTAGAACA AGGCTATCTC
  S
  TGTTAGGACC AAAGCGACTG ATGTCAGTCA CACCACAAGT CAGTGTCAGA TCTCACTTGG
  GAAGTTTACT GGGGTGGGGG GTGGGGTATG CGGAGGCTGC TGCTGACTGA GGGTGGAAGG
  GAACCAGAGG ACCCAGAGGA CGGGAGAGGA GGTGCTGGCC TTTTATAAGG GGATGTAGCC
  CAAGTGCATG AGGAGGATTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323116055	CHEV_9_97040075	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217541619					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97021709 () rs orientation: forward

Symbol	Name	Function Class
Gm57041	predicted gene, 57041	1427 bp upstream
Tssr86631	transcription start site region 86631	1457 bp upstream