rs217554309 SNP Detail

Summary

• ID
  rs217554309
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152461204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAGTCCAG CCCTGTCACT
  TAGTGCCAAG CCTCAGCCGC AACCCATGAC CCCTTCATGC CTTCGAAGCC AATACTTTGA
  AACCTAGGTG ACTCCTATAC TACCAAGTTC AGCTGCCGCA GAGGCACAGT GTGGGTGGCC
  TCTGGACCAC AGCTTGTGCA CTAACCCTCA GGAAACACTT CCCAGAAGAT TTCACCTTAA
  R
  GATGCGTAAC CACAGCTCGA TGGCTGCCGA TTCTTCCGCC CCCGCTGACC AGCATCCATT
  GTCCTAGCAA AGTAAAAGTT TGGCTTTAGT GATTTTGTTT CTTGTTCATC ACAGCTGATT
  TTTCAGCCCC AGCAGAACAG AGCCATGAAT TCTTCACACC AAGGACCCAG TGCAGTATTT
  GCTTCCCTCT GAAACTTCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320562570	CHEV_2_152445020	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217554309					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152461204 () rs orientation: forward

Symbol	Name	Function Class
Rr567403	regulatory region 567403	1709 bp distal
Rr567404	regulatory region 567404	1455 bp proximal