rs217556448 SNP Detail

Summary

• ID
  rs217556448
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:134270744 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAAACCAG CATTTCTTTC
  CACCCCAGGC CCCTTGCACA TCCACTTAAT TCCCCACTTC CCCTTACTCA TTTCTGCTTA
  TCCTTAAAGT CCAGGCTTAA GACAGTTTTC TCAGGGAAAC TCTTTTGACC TAAAGTGGGC
  CAGGCACTTG ACTCTGAGCA CCCCACTTCT GGTTAGCACC TTTGGTTGCT TCTCTTTGGA
  R
  CAGGTGAGTT ACTGGACCCC ACCCTCAAGG CCTGAACCCT TGAGGTTTCG GATTTTAGTG
  AATGCTGGAG GCCACGTGGG AGGTGAGCCC TGGCAGCTTC CCTTTTGAGG GACTGAAGTT
  CCTTATCAGT GAAAGGAGCC TGTGACTTTC TATGAATCAG TGGCTGAATT GCTAGAAATC
  TTAGTTGTAT ATTATCTTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322457588	CHEV_7_141860698	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217556448					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:134270744 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19845	CpG island 19845	958 bp proximal
Dock1	dedicator of cytokinesis 1	1672 bp upstream
Rr656983	regulatory region 656983	583 bp proximal
Rr656984	regulatory region 656984	1182 bp proximal
Rr656985	regulatory region 656985	1683 bp proximal
Tssr69615	transcription start site region 69615	677 bp upstream
Tssr69616	transcription start site region 69616	1635 bp upstream
Tssr69617	transcription start site region 69617	1652 bp upstream