ACAGTTGCAA AGCTGTCTTG ACTGCTAGAG CCCAGGGCAG AAGTAGGGAC ATCATTTTAA ACTAGCTATT GACTCTTGAC AAGGGGAAGA TTCTCACATC AGAGCAGGTG GGGAAGGGAG AATTACCTTG GCAACCAAAC ATGTCCCAGC ACCAGAGCTC TTGGTAGGAA TGAGGTGCGT GTGTGTGGGG GGGGGGGGGG R ATACACAGCT CTCCTTAAGA GCTGCCTAGC TGCGGCCCTG ATGGGGCTTC TTAAACAGCA GTGGAACACT TTTCCTTGAG CAGACTGAGG GGGAATTTAG CAATCAGCAT AGAGGCATGG CTGAGGGAGG GTCCTGGTGT GTAGCAGGGG TGGCAGCAGG GGACATCAAA AACTGGGACA CTTGTCAGGC CTGCCTCCTG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129P2/OlaHsd |
A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
BUB/BnJ |
C3H/HeH |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C58/J |
CAST/EiJ |
CBA/J |
CE/J |
DBA/1J |
DBA/2J |
FVB/NJ |
I/LnJ |
LEWES/EiJ |
LG/J |
MA/MyJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZB/BlNJ |
NZO/HlLtJ |
NZW/LacJ |
PL/J |
PWK/PhJ |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
SJL/J |
SM/J |
SWR/J |
WSB/EiJ |
ZALENDE/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss391457086 | MGP_WTSI_14_70364905 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | G | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | G |
SNP Consensus Information | ||||||||||||||||||||||||||||||||||||||||||||||
SNP | Consensus Type | 129P2/OlaHsd |
A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
BUB/BnJ |
C3H/HeH |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C58/J |
CAST/EiJ |
CBA/J |
CE/J |
DBA/1J |
DBA/2J |
FVB/NJ |
I/LnJ |
LEWES/EiJ |
LG/J |
MA/MyJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZB/BlNJ |
NZO/HlLtJ |
NZW/LacJ |
PL/J |
PWK/PhJ |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
SJL/J |
SM/J |
SWR/J |
WSB/EiJ |
ZALENDE/EiJ |
||||
rs217568380 | SNP | G | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss391457086 | MGP_WTSI_14_70364905 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | A/G |
Location: Chr14:70202547 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Pebp4 | phosphatidylethanolamine binding protein 4 | within coordinates | ||||||
Rr300152 | regulatory region 300152 | 55 bp proximal | ||||||
Rr389823 | regulatory region 389823 | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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