rs217578247 SNP Detail

Summary

• ID
  rs217578247
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:83572683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACATGGGGA CAGGTGTTTA
  TTTCTCTGAG ACAAGAGCAA GAATTTGTGC CGGGTGTGGT AGCGCACACC TTTAATCCCA
  GCACTTGGGA GGCAGAGGCT GGCGGATTTC TGAGTTCAAG GCCAGCTGGT CTACAAAGTA
  AGTTCCAGGA CAGCCAGGGC TATACAGAGA AACCCTGTCT CGAAAAACCA GAAAAAAAAA
  M
  CACATGAGTA TTTGTGGAAA AGATGCAGAA CAAGTTATTC CTGCCTGGTC ACGTCTCTTC
  TCTAGGACAG AGGATTACAC TGTCAGTGGT GGGAGGGGAC GTTGGGAAAG TGCTAGGAGC
  AGATAAAGGC GTGGGTGGCA GCCTTAGCAG TGACCATTGA GCATGGTGGA GCTGCCAGGC
  AAGAAGGAGA GCGCACAGCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324113674	CHEV_12_84866859	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217578247					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:83572683 () rs orientation: forward

Symbol	Name	Function Class
Dcaf4	DDB1 and CUL4 associated factor 4	within coordinates
Rr257993	regulatory region 257993	1283 bp distal
Rr261746	regulatory region 261746	1318 bp proximal
Rr265648	regulatory region 265648	117 bp proximal
Rr268609	regulatory region 268609	1919 bp proximal
Rr387528	regulatory region 387528	1016 bp upstream
Tssr114259	transcription start site region 114259	134 bp upstream