rs217632285 SNP Detail

Summary

• ID
  rs217632285
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:60727819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTACTGAG TAGAGAACAA
  AGGTATATTG TTTTAGACTC TTGGCTGTTG CATCTATAAG AACAATTGGA GTATAAAAAA
  TCTGATGAAT AATATGTTTA TTCAACAGAA TTCAGCCTTA GAACTGAGTT TTAGGTATAA
  ATATTCTCCT GTCTACTTTG TGTGTTTGTT CATAGTGTAT TTGTGTGTGG GGGGGTGGGG
  K
  GGGGGGGGGG CAGGACACAC ATGCATGCCT GAAAAGGCTA AAGATTGACT TGGGTGTCTT
  CCTGTCCCTC TTCATTTGCT GATGTAAGGT CTTTGGCCAA GGCTTTCCCA TCAGCTAGCC
  AGCTCACCCT AGGACTCTGT AGTCTCTAGA CAGGCCATCA TCACACCTAC CTGACTGGGT
  TCTAATGCTT GCCTGGCAAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322977415	CHEV_9_60668344	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217632285					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:60727819 () rs orientation: forward

Symbol	Name	Function Class
Gm9869	predicted gene 9869	1015 bp downstream
Rr196167	regulatory region 196167	619 bp distal
Rr196168	regulatory region 196168	1782 bp proximal
Rr201055	regulatory region 201055	1819 bp distal
Rr209918	regulatory region 209918	533 bp distal
Rr209919	regulatory region 209919	382 bp proximal
Rr209920	regulatory region 209920	1582 bp proximal
Rr209921	regulatory region 209921	1919 bp proximal
Rr383461	regulatory region 383461	383 bp upstream
Uaca	uveal autoantigen with coiled-coil domains and ankyrin repeats	within coordinates