rs217665068 SNP Detail

Summary

• ID
  rs217665068
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109905415 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCTTTGGT GTTGGGGATG
  GGAACCAGGG TGTGGTACAT GCTAAGCACA TGCTGTGCTA CTAAGCAGCA TCCCTGACCT
  TTGGAATCTT CATTTTTAAC AAGAGGATTC GTTTATTTCC TTTTCGGTAG CACTTTTAAA
  CTTCAGTTTA AAATGTAAGT TGTTGCTAAG GTAAAGTTTG CATTTGGAAT CTGTGTAGAC
  Y
  AAACCCAGTG CCCCATGCTC TACAAATGAG CAAACCTCTT TGGCCCCATG CATTATTTTA
  TGTCATAGGT CAAAGCCCAG CCTAATTAAG GGATTAGTTC AAGGTCACAC AATTAATCAA
  AAGATGGCAA CTTGCTGCCA GCCCTTCTTG ATGGCAGCTG CTCCAAGCAG GCTACTGGGT
  CGACTGTGTC ATCTAGGATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322395859	CHEV_7_117449722	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217665068					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109905415 () rs orientation: forward

Symbol	Name	Function Class
Rr159222	regulatory region 159222	414 bp distal
Rr159223	regulatory region 159223	15 bp distal
Rr159224	regulatory region 159224	586 bp proximal
Sbf2	SET binding factor 2	1805 bp downstream