rs217808251 SNP Detail

Summary

• ID
  rs217808251
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:34933965 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTTAGAAT CGGGCCCCAC
  ACGGGAGCAC CTAGCCATTT GGATTTTTAT GCATGCTGTA GATGTAGATT GACGATCGGA
  TTTGATGCTA CAGACCTCCA TTTTGGGACT TTACTCAGCC TCGCCAAGCT GTTCTCAGTA
  TGCAGATTGT TGCTACCCAC TGCGCGGATT CCGGGAGGAA AAATCAGCAT GCTTTGCAGT
  R
  CTCAGCGAAG CCAAGAGCAA TGCTCAGCGA AGCCAAGAGG CTGTGGAGAC TTGTCACCCC
  TGTGGAAGCA CTCAGGGGAC AGCGATTTGG CCGACCTCAA GGAGGCAAAG GCTAGCAGGG
  AACACAACGT CTTCCGCTAA AATGTCTTCC GCGCTGACAG AGGAACGGTT CTGTGAGAGG
  GCTCGCAAAA CAAAAAGGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322156713	CHEV_7_36019559	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217808251					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:34933965 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18864	CpG island 18864	19 bp proximal
Gm38989	predicted gene, 38989	within coordinates
Gm73040	predicted gene, 73040	809 bp upstream
n-TTagt9	nuclear encoded tRNA threonine 9 (anticodon AGT)	230 bp downstream
Rr645337	regulatory region 645337	1155 bp distal
Rr645338	regulatory region 645338	within coordinates
Rr645339	regulatory region 645339	91 bp proximal
Rr645340	regulatory region 645340	153 bp proximal
Rr645341	regulatory region 645341	820 bp proximal