rs217820600 SNP Detail

Summary

• ID
  rs217820600
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132185551 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAAGACTCC TATAAAAAAG
  AAAGTGGACT GAAAGTTTTC CTGGCAGAAA AAGAAAAAAA AAGAAAAAGA AAAAGAGAAG
  GAGAAGGAGA AAAAGTATCT GACTTTTCAA ATCTAAGACT ATGAGCCTTT TGTCTTTCTT
  CTCTGTGTAG CCTTGGCTGT CTTGGAACTT GCACTGTAGA CCACAGGTCT GCCTGCCTCT
  R
  CCTCCTGAGT GCCAGGACTA ATGTTAATGG CATGCACCAC CAGCACATGG CCCTTTTCTT
  GCCTGAACAT GTCTGTGTAC TGAGTGTGTG CCTGGTGCCT GTGTACTTCA AAAGAGAGCA
  TCCAATCACC TAGAACTGGA CTCCTACGGA AGGTTGTCAG CACTCAAGGA TGTGTTGGAA
  TTAAGCCTGG TCCTCTCTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321333566	CHEV_4_132014155	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217820600					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132185551 () rs orientation: forward

Symbol	Name	Function Class
Med18	mediator complex subunit 18	491 bp downstream
Rr377204	regulatory region 377204	within coordinates