rs217826106 SNP Detail

Summary

• ID
  rs217826106
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:33606584 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aaccatcct taatgacatc tgacaTATTT
  TCTTTCATTC GTTGTTGCAT GATTTTTCAT CAAAAGAATA TGAGCCAAGT TGTGTCTCGT
  GCCCCCAGTG GAGACATCCC AAAGGACCAG AAGAGAATTA GGTCACTGTC TAGCAGGAAG
  Y
  TTACTGGCAA AACAATAAAG AAAAACCAAG TCTTCACCCT TGAGAGTTAA TCCAGGGAAA
  AGTGAGATAA TAGGGCCAAG GTGGATAATG GGGCTTGCAG CCAAGGTTGT CAACATGAGT
  TTTATTCCTG GGGCCCACCT GGTGAGAGAA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325139898	CHEV_16_33786300	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217826106					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:33606584 () rs orientation: forward

Symbol	Name	Function Class
Gm15657	predicted gene 15657	within coordinates
Gm15658	predicted gene 15658	within coordinates
Tssr140846	transcription start site region 140846	754 bp downstream
Tssr140847	transcription start site region 140847	890 bp downstream
Tssr140848	transcription start site region 140848	952 bp downstream