rs217869983 SNP Detail

Summary

• ID
  rs217869983
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:80072302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGTAAGCG CTAGAAGCTT
  ATAAGTCATT GGAGTCAGGC TCCAAACAGT CAGGATCGGA TGTGTGTAAA GTGTGGGAAC
  TGCTCCTTTT AATTTTAGGT TTATTTTGTT TTGCTGCTTA GTATACTTCC ATCATTAGCC
  CTTAAAGGAA CAGAATAATA ATTATTTTAA TTTTTTTCCC CAAGAGGGCT GGAGCAACAG
  Y
  TCAGTATTTA AGGGCTCTTG CTGCTCTTAC AGAGGACTCT GGTTCCCAGC CACCACATGG
  TGGCTCACAG CCATCTGTAA CGGCATCTGA TGCCCTCTTC TGGGGTGTCT GAAGACAGCT
  ACAGTGTACT CATATACAAA AAAAAAAAAA AAATAATAAT AATAATTCTT TACTTTAAAA
  GAGAGAGAGA GAGCGAGAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323761710	CHEV_11_79994978	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217869983					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:80072302 () rs orientation: forward

Symbol	Name	Function Class
D11Bhm113	DNA segment, Chr 11, Boehm 113	403 bp distal
Rr386348	regulatory region 386348	within coordinates
Rr452448	regulatory region 452448	1625 bp distal
Rr452449	regulatory region 452449	87 bp proximal
Rr452450	regulatory region 452450	1885 bp proximal
Rr452451	regulatory region 452451	1892 bp proximal