rs217912450 SNP Detail

Summary

• ID
  rs217912450
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3729832 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGTTTCTG TTGCTGTGAT
  GAAGCACATG ACCAAAAACC AACTGAGGAG GAAAGGGTTT GTTGGGCCTA TCCTTCCAGC
  TTGCTGTTCA TCATCAAATG AAGCCAGGAC AGGAACCTGG AGGCAGGAGC TAATGCAGAG
  GCCATGGACT GATGCTGCCT ACTGCCTTGC TCCCATGGCC TGCTCAGCTT TTCTCCTCCC
  M
  CAATAACCCA GGACCACCCA CAGGGAGCTG AGCCTTCAAC CATGAATCAA GAAAATGTCC
  TGCCAGGCAG TGGTGGCATA TGCCTTTAAT CCCAGCACTT GGGAGGCAGA GGCAGGCGGA
  ATTCTGAGTT CAAGGCCAGC CTGGTCTACA GAGTGAGTTC CCTAACAGCC AGGGCTACAC
  AGAAAAACCC TGCCATGAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320205104	CHEV_2_3646067	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217912450					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3729832 () rs orientation: forward

Symbol	Name	Function Class
Fam107b	family with sequence similarity 107, member B	within coordinates
Rr367092	regulatory region 367092	990 bp downstream
Rr396754	regulatory region 396754	1672 bp downstream
Tssr15911	transcription start site region 15911	1610 bp downstream
Tssr22381	transcription start site region 22381	1987 bp upstream