rs217994651 SNP Detail

Summary

• ID
  rs217994651
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110974548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATAACTCT GGCTGTTCTG
  GAACTTACTC TGTAGGCCAG GCTGGCCTCA AACTAACAGA TCCACCTGCC TCTACCTCTG
  CCTCCCTACT GCTGCGATTA AAGGCATCTG GTACCACCTA GCTTGTGTTT TATTTAATTT
  TTTTTGAAGT ATAATTTTCT CTCTCCCTTC CTTCCTTCCT TTTAAATCTA TTTTTGAGAC
  W
  TGATCTCCTT TTGTGTTGTG CTGACTGGCT GGGAGCTCAC TGTGTAGACA TGGTTAACCA
  CACCCGGTAA AGTGAACTTT TAATATTCAG TCAGCACACA TTAATTAAAG ATCTATTATG
  TATGGACACT GCTACATTTA GAGGGTGTAT ATAGTTCTAC CATAGAGCTC AGATTCAAAA
  GGGGAAATAG GCACTGAAGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323195912	CHEV_9_111047984	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217994651					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110974548 () rs orientation: forward

Symbol	Name	Function Class
Lrrfip2	leucine rich repeat (in FLII) interacting protein 2	within coordinates
Rr687307	regulatory region 687307	441 bp distal
Tssr87483	transcription start site region 87483	1215 bp upstream