rs218191739 SNP Detail

Summary

• ID
  rs218191739
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:34932485 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGACT CAAGTGCCAA CCAACGTCTC
  Y
  GACTGGTCCT CACTTAGCTT TTTAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322156696	CHEV_7_36018079	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218191739					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:34932485 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18864	CpG island 18864	1499 bp proximal
Gm38989	predicted gene, 38989	within coordinates
n-TTagt9	nuclear encoded tRNA threonine 9 (anticodon AGT)	1710 bp downstream
Rr645337	regulatory region 645337	within coordinates
Rr645338	regulatory region 645338	695 bp proximal
Rr645339	regulatory region 645339	1571 bp proximal
Rr645340	regulatory region 645340	1633 bp proximal