rs218219323 SNP Detail

Summary

• ID
  rs218219323
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:122558552 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGGC TGTTGTTTGT TTTTGTTTTT
  S
  TTTTTTTACG ACAGGTTTTT CTGTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322845233	CHEV_8_124355713	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218219323					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:122558552 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21206	CpG island 21206	1943 bp distal
Gm24283	predicted gene, 24283	1271 bp downstream
Gm42047	predicted gene, 42047	1325 bp upstream
Gm64252	predicted gene, 64252	1498 bp downstream
Rr401186	regulatory region 401186	791 bp upstream
Rr671930	regulatory region 671930	1530 bp distal
Rr671931	regulatory region 671931	550 bp proximal
Rr671932	regulatory region 671932	910 bp proximal