rs218299841 SNP Detail

Summary

• ID
  rs218299841
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147978771 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCACCCTGC AAATGCTCCT
  CCACCTCCCA CACCTCCTCC CCACCCCATT CTGTCTCCAC TTGAATGCCC CCATCCCCCA
  GCACACCTGA CCTCTAAACT CCCTGGAGCC TCCAGTCTCT TGAGGGTTAG GTGCATCATC
  TCTGAATGAA CACAGACCTG GAAGTCCTCT AGTGGATATG TGTTGGGGGC CTCATATCAG
  M
  TAGTGTATGC TGCATGTTTG GTGGTCCAGT GTTTGAAAGA TCTTGGGGTC CAGATTAATT
  GAGACTGCTG GTCCTCCTAC AGGATCACCC TTCTCCTCAG GTTCTTTCAG CCTTCCTAAT
  TCAACAACAG GGATCAGCTG CTTCTGTCCA TTGGTTGGGT GCAAATATCT GCACCTGACT
  CTTTCAGCTG CTTGTTGGGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321014846	CHEV_3_147936099	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218299841					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147978771 () rs orientation: forward

Symbol	Name	Function Class
Rr375892	regulatory region 375892	828 bp upstream
Rr587183	regulatory region 587183	669 bp distal
Rr587184	regulatory region 587184	367 bp distal