rs218313384 SNP Detail

Summary

• ID
  rs218313384
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136348585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgtgtgtgc tggtacatgt gtgtatgtgc
  atgtttatgt gtatctctgt gagtatgagt gtatatgtga gtgtgtgact gtgtgcaagt
  gtatatatgt gtgcatatat gtgtggctgt gagtatgtgt gtttatgtgc tagtgtgtgt
  R
  tgtgtgtgtt tatgtgctag tgtgtgtgtg tatgtgtgta tatatgtgtg tgtgctggtg
  tgtttctttg tatgtatgtg agtatgtgtg tgtatgtata tgaatgtgta tctgtgtctg
  tgtgtgtgtT TGATCTTTCT TGTTTCACAG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321356443	CHEV_4_136177189	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218313384					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136348585 () rs orientation: forward

Symbol	Name	Function Class
Lactbl1	lactamase, beta-like 1	1347 bp upstream
Rr398615	regulatory region 398615	51 bp upstream
Rr602387	regulatory region 602387	63 bp proximal
Rr602388	regulatory region 602388	225 bp proximal
Tssr39716	transcription start site region 39716	1338 bp upstream
Tssr39717	transcription start site region 39717	1357 bp upstream