rs218334906 SNP Detail

Summary

• ID
  rs218334906
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119799217 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCACAACTG TTTTTGTTCA
  AACAGGTTTA GGAGCTAGGT CTGTTCTGGG AGAGCTTTGC CGTAAAGGGA TTGCGTGGTC
  ACGTTTTGTC TGTCTCCACT TGACCTCCAC AAACAAGACA GCCCAGGACT CGGCCCTATG
  GCCCTACATA GGAGCCGGGA AGGCCTGTCT GATCAGGGCC TGAGTCCGTG GAGGAGTCTG
  W
  AGAGGTGATG AAGCTCCCAC CAAGTGCCCT AAATTACCAG AGAAACCTCT CAGAACCTTT
  GGAAGAGAGA CACAGGATGC TGCACCCCCA GCTCGATCTC TGCCCAAGCG TTTCCCAGCC
  CCAGTGAGAG GGGACAGGAC AACAGGATGT TGCAGGGCAC TTTATCCAGT CACAGGTACT
  CATGCCCAAC TACAGGCAGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323223755	CHEV_9_119879269	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218334906					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119799217 () rs orientation: forward

Symbol	Name	Function Class
Csrnp1	cysteine-serine-rich nuclear protein 1	1012 bp downstream
Rr688588	regulatory region 688588	within coordinates
Rr688589	regulatory region 688589	767 bp proximal