rs218337481 SNP Detail

Summary

• ID
  rs218337481
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44386740 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAAAGAAT CTTGTATTGA
  TTGGATGAAG TGATTTTCCT TTCTAGTGTC TGTTGCTGTG GTGGTGGATA TCTGTATCAC
  TGAAATTTGG GTTGAGGTAG GTGGACTTGG TTTGGAGCCA GCCTAGGCTA CATAGTGAGA
  CCCTCTCTCG AAACAGCCAA GTGTGTTGGG GTTGGAGAGT TGGCTCAGCA ATTAAGAGCA
  K
  CACTGACTGC TCTTCCAGAG GTCCTTAGTT CAATTCCCAG TAACCACATG GTGTCTCACA
  ACCATCTGTA ATGGGATCCG ATACCCCCTT CTTGTGTGTC TGAAGGCAGC TACAGTGTAC
  TCAACATACA TTAAACAAAC AAACAAGAAA CAAACAAACA AAAAAAAGCC AGGTGTGGTG
  GCGCACACCT TTAATCCCAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322940973	CHEV_9_44283526	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218337481					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44386740 () rs orientation: forward

Symbol	Name	Function Class
C030014I23Rik	RIKEN cDNA C030014I23 gene	within coordinates
Gm22540	predicted gene, 22540	968 bp downstream
Gm47204	predicted gene, 47204	1269 bp downstream
Rr195027	regulatory region 195027	1940 bp distal
Rr195028	regulatory region 195028	461 bp proximal
Rr203856	regulatory region 203856	1990 bp distal
Rr203857	regulatory region 203857	500 bp proximal
Rr209142	regulatory region 209142	540 bp distal
Rr209143	regulatory region 209143	861 bp proximal