rs218355870 SNP Detail

Summary

• ID
  rs218355870
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:76474818 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATTGAGTG GAAAGAAGAT
  GCAGAGGGAC TACCAGTTGG GTGGCATTTT ATCAAGTTTT AAACATGCAA TGAAAGGTGG
  ATATAAAAGG TGTATGGATA CTCTATATAT TTTTTATAGA TAGAACAATA TATTATAGAT
  TGGATTTTTT TAAAGTTTTA TTTTATGTGT ATGGATGTAT GGCTTGCATG TATGTCTGTG
  M
  ACCACATGTG TGCAGGGCCT ACAGAGTCCA GTAGGGTGTG GCAGAACCCC TGGACCTAGA
  TGGTTGTAAG CCATCTGAGG GTGCTGAGAA TTAGCCTGTG GTCCCCAGCA AGAGCAGCTA
  GTACTTTTAG CAGCAGAGCC AACTCTCTGG TCCCTTAGAC TTTAGACACC AGAATCTGGC
  TTATGGTTCC TGAGGCTGCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325700420	CHEV_18_76501401	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218355870					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:76474818 () rs orientation: forward

Symbol	Name	Function Class
Tssr151998	transcription start site region 151998	1308 bp upstream