TCTTC TTATTCATAG TCCTCGTTCC
Y
CCCATATCTC TTCTTCCCAC TTCTT
Y = C/T
Note: Sequence in lower case indicates low-complexity or repetitive sequence |
| Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
|---|---|---|---|---|---|---|---|
| ss322198937 | CHEV_7_51734942 | CHEVERUD | SCREENING_POP | f | SNP | T | C |
| SNP Consensus Information | |||||||
| SNP | Consensus Type | LG/J |
SM/J |
||||
| rs218366532 | SNP | T | C | ||||
| Location: Chr7:44128996 () rs orientation: forward | ||||||||
| Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
|---|---|---|---|---|---|---|---|---|
| Tssr2226 | transcription start site region 2226 | 1627 bp downstream | ||||||
| Tssr2227 | transcription start site region 2227 | 552 bp downstream | ||||||
| Tssr2228 | transcription start site region 2228 | 506 bp upstream | ||||||
| Tssr2229 | transcription start site region 2229 | 782 bp upstream | ||||||
| Tssr2230 | transcription start site region 2230 | 961 bp upstream | ||||||
| Tssr2231 | transcription start site region 2231 | 1094 bp upstream | ||||||
| Tssr2232 | transcription start site region 2232 | 1269 bp upstream | ||||||
| Tssr2233 | transcription start site region 2233 | 1302 bp upstream | ||||||
| Tssr2234 | transcription start site region 2234 | 1461 bp upstream | ||||||
| Tssr66248 | transcription start site region 66248 | 1996 bp downstream | ||||||
| Tssr66249 | transcription start site region 66249 | 1973 bp downstream | ||||||
| Tssr66250 | transcription start site region 66250 | 1954 bp downstream | ||||||
| Tssr66251 | transcription start site region 66251 | 1929 bp downstream | ||||||
| Tssr66252 | transcription start site region 66252 | 1898 bp downstream | ||||||
| Tssr66253 | transcription start site region 66253 | 1870 bp downstream | ||||||
| Tssr66254 | transcription start site region 66254 | 1822 bp downstream | ||||||
| Tssr66255 | transcription start site region 66255 | 1795 bp downstream | ||||||
| Tssr66256 | transcription start site region 66256 | 1746 bp downstream | ||||||
| Tssr66257 | transcription start site region 66257 | 1735 bp downstream | ||||||
| Tssr66258 | transcription start site region 66258 | 1692 bp downstream | ||||||
| Tssr66259 | transcription start site region 66259 | 1656 bp downstream | ||||||
| Tssr66260 | transcription start site region 66260 | 1549 bp downstream | ||||||
| Tssr66261 | transcription start site region 66261 | 1528 bp downstream | ||||||
| Tssr66262 | transcription start site region 66262 | 1521 bp downstream | ||||||
| Tssr66263 | transcription start site region 66263 | 1509 bp downstream | ||||||
| Tssr66264 | transcription start site region 66264 | 1485 bp downstream | ||||||
| Tssr66265 | transcription start site region 66265 | 1442 bp downstream | ||||||
| Tssr66266 | transcription start site region 66266 | 1425 bp downstream | ||||||
| Tssr66267 | transcription start site region 66267 | 1388 bp downstream | ||||||
| Tssr66268 | transcription start site region 66268 | 1372 bp downstream | ||||||
| Tssr66269 | transcription start site region 66269 | 1336 bp downstream | ||||||
| Tssr66270 | transcription start site region 66270 | 1301 bp downstream | ||||||
| Tssr66271 | transcription start site region 66271 | 1269 bp downstream | ||||||
| Tssr66272 | transcription start site region 66272 | 1217 bp downstream | ||||||
| Tssr66273 | transcription start site region 66273 | 1199 bp downstream | ||||||
| Tssr66274 | transcription start site region 66274 | 1194 bp downstream | ||||||
| Tssr66275 | transcription start site region 66275 | 1174 bp downstream | ||||||
| Tssr66276 | transcription start site region 66276 | 1154 bp downstream | ||||||
| Tssr66277 | transcription start site region 66277 | 1134 bp downstream | ||||||
| Tssr66278 | transcription start site region 66278 | 1090 bp downstream | ||||||
| Tssr66279 | transcription start site region 66279 | 1045 bp downstream | ||||||
| Tssr66280 | transcription start site region 66280 | 1023 bp downstream | ||||||
| Tssr66281 | transcription start site region 66281 | 983 bp downstream | ||||||
| Tssr66282 | transcription start site region 66282 | 966 bp downstream | ||||||
| Tssr66283 | transcription start site region 66283 | 952 bp downstream | ||||||
| Tssr66284 | transcription start site region 66284 | 940 bp downstream | ||||||
| Tssr66285 | transcription start site region 66285 | 926 bp downstream | ||||||
| Tssr66286 | transcription start site region 66286 | 887 bp downstream | ||||||
| Tssr66287 | transcription start site region 66287 | 851 bp downstream | ||||||
| Tssr66288 | transcription start site region 66288 | 826 bp downstream | ||||||
| Tssr66289 | transcription start site region 66289 | 744 bp downstream | ||||||
| Tssr66290 | transcription start site region 66290 | 706 bp downstream | ||||||
| Tssr66291 | transcription start site region 66291 | 680 bp downstream | ||||||
| Tssr66292 | transcription start site region 66292 | 648 bp downstream | ||||||
| Tssr66293 | transcription start site region 66293 | 626 bp downstream | ||||||
| Tssr66294 | transcription start site region 66294 | 602 bp downstream | ||||||
| Tssr66295 | transcription start site region 66295 | 337 bp downstream | ||||||
| Tssr66296 | transcription start site region 66296 | 166 bp downstream | ||||||
| Tssr66297 | transcription start site region 66297 | 142 bp downstream | ||||||
| Tssr66298 | transcription start site region 66298 | 87 bp downstream | ||||||
| Tssr66299 | transcription start site region 66299 | 67 bp downstream | ||||||
| Tssr66300 | transcription start site region 66300 | 44 bp downstream | ||||||
| Tssr66301 | transcription start site region 66301 | 28 bp downstream | ||||||
| Tssr66302 | transcription start site region 66302 | within coordinates | ||||||
| Tssr66303 | transcription start site region 66303 | 16 bp upstream | ||||||
| Tssr66304 | transcription start site region 66304 | 24 bp upstream | ||||||
| Tssr66305 | transcription start site region 66305 | 34 bp upstream | ||||||
| Tssr66306 | transcription start site region 66306 | 68 bp upstream | ||||||
| Tssr66307 | transcription start site region 66307 | 125 bp upstream | ||||||
| Tssr66308 | transcription start site region 66308 | 178 bp upstream | ||||||
| Tssr66309 | transcription start site region 66309 | 199 bp upstream | ||||||
| Tssr66310 | transcription start site region 66310 | 237 bp upstream | ||||||
| Tssr66311 | transcription start site region 66311 | 314 bp upstream | ||||||
| Tssr66312 | transcription start site region 66312 | 330 bp upstream | ||||||
| Tssr66313 | transcription start site region 66313 | 351 bp upstream | ||||||
| Tssr66314 | transcription start site region 66314 | 359 bp upstream | ||||||
| Tssr66315 | transcription start site region 66315 | 379 bp upstream | ||||||
| Tssr66316 | transcription start site region 66316 | 438 bp upstream | ||||||
| Tssr66317 | transcription start site region 66317 | 450 bp upstream | ||||||
| Tssr66318 | transcription start site region 66318 | 495 bp upstream | ||||||
| Tssr66319 | transcription start site region 66319 | 518 bp upstream | ||||||
| Tssr66320 | transcription start site region 66320 | 545 bp upstream | ||||||
| Tssr66321 | transcription start site region 66321 | 563 bp upstream | ||||||
| Tssr66322 | transcription start site region 66322 | 583 bp upstream | ||||||
| Tssr66323 | transcription start site region 66323 | 629 bp upstream | ||||||
| Tssr66324 | transcription start site region 66324 | 658 bp upstream | ||||||
| Tssr66325 | transcription start site region 66325 | 688 bp upstream | ||||||
| Tssr66326 | transcription start site region 66326 | 729 bp upstream | ||||||
| Tssr66327 | transcription start site region 66327 | 743 bp upstream | ||||||
| Tssr66328 | transcription start site region 66328 | 759 bp upstream | ||||||
| Tssr66329 | transcription start site region 66329 | 798 bp upstream | ||||||
| Tssr66330 | transcription start site region 66330 | 817 bp upstream | ||||||
| Tssr66331 | transcription start site region 66331 | 831 bp upstream | ||||||
| Tssr66332 | transcription start site region 66332 | 852 bp upstream | ||||||
| Tssr66333 | transcription start site region 66333 | 900 bp upstream | ||||||
| Tssr66334 | transcription start site region 66334 | 912 bp upstream | ||||||
| Tssr66335 | transcription start site region 66335 | 921 bp upstream | ||||||
| Tssr66336 | transcription start site region 66336 | 930 bp upstream | ||||||
| Tssr66337 | transcription start site region 66337 | 948 bp upstream | ||||||
| Tssr66338 | transcription start site region 66338 | 1004 bp upstream | ||||||
| Tssr66339 | transcription start site region 66339 | 1055 bp upstream | ||||||
| Tssr66340 | transcription start site region 66340 | 1100 bp upstream | ||||||
| Tssr66341 | transcription start site region 66341 | 1145 bp upstream | ||||||
| Tssr66342 | transcription start site region 66342 | 1207 bp upstream | ||||||
| Tssr66343 | transcription start site region 66343 | 1239 bp upstream | ||||||
| Tssr66344 | transcription start site region 66344 | 1384 bp upstream | ||||||
| Tssr66345 | transcription start site region 66345 | 1417 bp upstream | ||||||
| Tssr66346 | transcription start site region 66346 | 1473 bp upstream | ||||||
| Tssr66347 | transcription start site region 66347 | 1511 bp upstream | ||||||
| Tssr66348 | transcription start site region 66348 | 1552 bp upstream | ||||||
| Tssr66349 | transcription start site region 66349 | 1576 bp upstream | ||||||
| Tssr66350 | transcription start site region 66350 | 1604 bp upstream | ||||||
| Tssr66351 | transcription start site region 66351 | 1612 bp upstream | ||||||
| Tssr66352 | transcription start site region 66352 | 1648 bp upstream | ||||||
| Tssr66353 | transcription start site region 66353 | 1722 bp upstream | ||||||
| Tssr66354 | transcription start site region 66354 | 1736 bp upstream | ||||||
| Tssr66355 | transcription start site region 66355 | 1763 bp upstream | ||||||
| Tssr66356 | transcription start site region 66356 | 1780 bp upstream | ||||||
| Tssr66357 | transcription start site region 66357 | 1794 bp upstream | ||||||
| Tssr66358 | transcription start site region 66358 | 1806 bp upstream | ||||||
| Tssr66359 | transcription start site region 66359 | 1832 bp upstream | ||||||
| Tssr66360 | transcription start site region 66360 | 1844 bp upstream | ||||||
| Tssr66361 | transcription start site region 66361 | 1870 bp upstream | ||||||
| Tssr66362 | transcription start site region 66362 | 1902 bp upstream | ||||||
| Tssr66363 | transcription start site region 66363 | 1919 bp upstream | ||||||
| Tssr66364 | transcription start site region 66364 | 1952 bp upstream | ||||||
| Tssr66365 | transcription start site region 66365 | 1972 bp upstream | ||||||
| Tssr66366 | transcription start site region 66366 | 1992 bp upstream | ||||||
| Tssr72200 | transcription start site region 72200 | 1131 bp upstream | ||||||
| Tssr72201 | transcription start site region 72201 | 621 bp upstream | ||||||
| Tssr72202 | transcription start site region 72202 | 221 bp downstream | ||||||
| Tssr72203 | transcription start site region 72203 | 607 bp downstream | ||||||
| Tssr72204 | transcription start site region 72204 | 1203 bp downstream | ||||||
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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