rs218380460 SNP Detail

Summary

• ID
  rs218380460
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131708560 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTTCTGAG TTCCCACCCA
  CTTGATTATT AGCTCTGGGA GAAACCTGAA ATATTTATTT CTAACAAGTT TCTAGGTGAT
  GCCAAATGCC ACTGACTGAG AGACCACACT TAGAATCCCT GGCCTTGGGG AATGGCTCTG
  ATTCAGACAT CATTAGCCTC ATTTGGAATG GTCATTATAG CTGAAGCTAG AGCCTCTTCA
  R
  GGCCAGCCTA TAAACCTGGG CAGAGCTCTG CAGTCTGCAT ATTTAATAAA TACCTAGGCA
  ATTCTTAGGT GATGCTCCCT GTGAAACGGA AACGCACCTT TCTGCCTCTC TGTATTTTCA
  AATATAACTT TATTTTAGAA AATACAATCT ATTTTTCTTT AGATGTTCAC ATTTTTATCT
  TTACAATGTT TTGGTTGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321329596	CHEV_4_131537164	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218380460					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131708560 () rs orientation: forward

Symbol	Name	Function Class
Epb41	erythrocyte membrane protein band 4.1	within coordinates
Rr600833	regulatory region 600833	696 bp proximal
Rr600834	regulatory region 600834	849 bp proximal
Rr600835	regulatory region 600835	1515 bp proximal
Tssr43622	transcription start site region 43622	1477 bp downstream