rs218408498 SNP Detail

Summary

• ID
  rs218408498
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:37298191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GATTTTGGA ACGACCATCC ACACTGCCAT
  GCTTAATGGG AACACACACA TGGAATCACA CCACGTAGCT CTAACTCACA CATCCTCTCA
  GCTCATCTTG CTTTCCCAGT ACATGAAACG AGAAGCAAGG TTGTTgccgg gtgtggtggc
  G
  cacaccttta atcccagcac ttgagaggca gaggcaggcg gatttctgag ttccaggaca
  gccagagtta cacagagaaa ccctgtctcg caaaacaaaa caaaacaaaa caaaacaaaa
  caaacaaaca aaGAAGCAAG GTTGTCTCCA                                 
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319691071	CHEV_1_37315955	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218408498					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:37298191 () rs orientation: forward

Symbol	Name	Function Class
Cnga3	cyclic nucleotide gated channel alpha 3	within coordinates
Gm69908	predicted gene, 69908	1247 bp downstream
Rr409496	regulatory region 409496	456 bp distal