rs218431762 SNP Detail

Summary

• ID
  rs218431762
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13439666 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGATGCAGA AGGAGCCCAT
  GTAGAATACC CCCTGCTTCT CCAGTCTGAA TCAACAACTC AAGACCCCTG CTGGCTAAGA
  TTTCTTAAGA GCAGAACATG ATGAGTGTGT GTGGAGTCCG GGTGGGTAGA TGAAGGGCCC
  AGTCCCCCAT CGTTGAGTGT GGGGAGGGGC CATTTCCAGA GCAGGACCCT TGTAACTCAC
  Y
  CTGTTCATTT TAATAATGAA GCAGGGCTTC CCCTCCTCGA AGCCGAAGCT GGGGTCCGCC
  AGGCCTGAGC AGTTTTGTAG CATGTCTGCA GTGAACTTGC AGGAGAACTT GGTGTGGTTT
  GGAGCTGCAA AGCTCTCCTG GAAGAAGTAC TTTTCAGATG TACAGTTGAT GCTGTCCTGC
  TGGGATGCTG GGGTATAGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322506493	CHEV_8_13389666	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218431762					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13439666 () rs orientation: forward

Symbol	Name	Function Class
Atp4b	ATPase, H+/K+ exchanging, beta polypeptide	within coordinates
Gm45410	predicted gene 45410	1440 bp upstream
Rr659923	regulatory region 659923	1182 bp proximal
Tssr80441	transcription start site region 80441	851 bp upstream
Tssr80442	transcription start site region 80442	27 bp downstream
Tssr80443	transcription start site region 80443	193 bp downstream
Tssr80444	transcription start site region 80444	433 bp downstream