rs218432767 SNP Detail

Summary

• ID
  rs218432767
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:58294532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACTTCATTG ACTGCTCCTT CCCCGCGATG CAGTTCTGAA
  TCCTCCCTGT AGCAGGGGGT CCCACTTCTT GTGAGCACCA GACTCGACAG CAAAGCAGAC
  R
  CTACACCAGG ATCCTTCTGG AGAGCTTGAT TGCAGAGGCG AAAAGACCCC AAGCCCAGAA
  CTGGTGCTAC TTATATAGGC CTAGGAGAGG CGTGTCTCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324352924	CHEV_13_58248079	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218432767					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:58294532 () rs orientation: forward

Symbol	Name	Function Class
1700066J03Rik	RIKEN cDNA 1700066J03 gene	231 bp upstream
Cpgi5721	CpG island 5721	1874 bp proximal
Gm48295	predicted gene, 48295	1025 bp downstream
Rr480978	regulatory region 480978	1559 bp proximal
Rr480979	regulatory region 480979	1828 bp proximal
Tssr120063	transcription start site region 120063	1795 bp upstream
Tssr120064	transcription start site region 120064	1820 bp upstream
Tssr120065	transcription start site region 120065	1835 bp upstream