rs218455521 SNP Detail

Summary

• ID
  rs218455521
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:151968096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCAAATTTA GCATGCGTTT TCCCCTTTGT
  AACATTTTTT TTTCTTGAAG AAGGGTGGGA ATTGCTGTTG AGTTTATTGA AAAGTAGTCA
  ACCATTCTCT GGGAGTGTTT AGGGCATGTC CCCAAAGTTT CACTGGTGAT AAAATGAAAA
  W
  GAACAATATC CAATGTGCAG GTGAATGTGT GTGTCATAGG AACATTTTCA CATCAAGAAC
  ACTGAAGACC ATATACTCTG TTCTTCACCT CAGAGGCCAC AGAGCAAGCA CTTCATACAT
  GTCCTGAGAA AGCCCACCCA TTCTGTGAAC                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320062302	CHEV_1_153939475	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218455521					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:151968096 () rs orientation: forward

Symbol	Name	Function Class
1700025G04Rik	RIKEN cDNA 1700025G04 gene	155 bp upstream
Cpgi853	CpG island 853	1094 bp distal
Rr420418	regulatory region 420418	1730 bp distal