rs218470212 SNP Detail

Summary

• ID
  rs218470212
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:79517561 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTCTCTC TCTTTTGCTT
  TGCTATTCTT TTTTCTTCTT CTTCATTTTA TTTTTTTTAT TTAATCTTTT CTTACAGTCC
  AGGTATTATT CCCCTCCTGG TCCACTCTAT GACTTTTCGA CATCCCATAC CTCCCATCCT
  CAGTCTCCAT GAAGGTGTTC CCACCACCAC ACCACCAGAT CTCCCTACTC CCTGGGGCCT
  Y
  CAGTTTCTTG AGGATTAGAT GCATCTTATT TCACTGAGGC CAGACCAGGT AGTCCTCTGC
  TGTATATGTG TTGGGGACCT CCTATCAGCT AGTGTATGAT GCCTGGTTAC TGGCTCAGTG
  TCTGAGAGAT CTCATGGGTC TAGGTTAGTT GGGACTTCTG GTCTTCCTAT AGTGTCACCC
  TCCTCCTTAA CCTCTTCCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321835105	CHEV_6_79490572	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218470212					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:79517561 () rs orientation: forward

Symbol	Name	Function Class
Gm6261	predicted gene 6261	630 bp upstream